ydjM [2018-06-29 14:57:12]

member of the WalR regulon

Locus: BSU06250

Isoelectric point: 10.57

Molecular weight: 13.04 kDa

Protein length: 123 aa

Gene length: 369 bp

Function: may be involved in cell wall metabolism (WalR regulon)

Product: unknown

Essential: no

Synonyms: yzvA

Genomic Context

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Categories containing this gene/protein

• Cellular processes → Cell envelope and cell division → Cell wall/ other
• Groups of genes → Secreted proteins

Gene

Coordinates: 679,390 → 679,761

The protein

Localization

• extracellular (signal peptide) PubMed

Expression and Regulation

Operons

• Genes: ydjM
  Description: PubMed

  Regulatory mechanism

  • WalR: activation, PubMed, in WalR regulon
  • PhoP: activation, PubMed, in PhoP regulon

  Regulation

  • activated by WalR PubMed

  Additional information

  • the terminator is NusA-dependent [ http://www.nature.com/articles/nmicrobiol20157 Reference]

• Genes: ydjM-ydjN
  Description: PubMed

  Regulatory mechanism

  • WalR: activation, PubMed, in WalR regulon
  • PhoP: activation, PubMed, in PhoP regulon

  Regulation

  • activated by WalR PubMed

  Additional information

  • the terminator is NusA-dependent [ http://www.nature.com/articles/nmicrobiol20157 Reference]

Biological materials

Mutant

• MGNA-C220 (ydjM::erm), available at the NBRP B. subtilis, Japan
• BKE06250 (ΔydjM::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTCGTCCCCCTGTTTGT, downstream forward: _UP4_TAATGTACATATATAATCTG
• BKK06250 (ΔydjM::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTCGTCCCCCTGTTTGT, downstream forward: _UP4_TAATGTACATATATAATCTG

References

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